Popular repositories

1. ArchR ArchR Public

   ArchR : Analysis of Regulatory Chromatin in R (www.ArchRProject.com)

   R 344 124

2. chromVAR chromVAR Public

   chromatin Variability Across Regions (of the genome!)

   R 142 36

3. NucleoATAC NucleoATAC Public

   nucleosome calling using ATAC-seq

   Python 100 29

4. 10x-scATAC-2019 10x-scATAC-2019 Public

   Publication Page for Satpathy*, Granja* et al 2019

   R 87 53

5. MPAL-Single-Cell-2019 MPAL-Single-Cell-2019 Public

   Publication Page for MPAL Paper 2019

   R 74 36

6. motifmatchr motifmatchr Public

   Fast motif matching in R

   C++ 37 10